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Species belonging to selected taxon:
Vitis shuttleworthii
,
Vitis vinifera
ABOUT THIS RECORD
ID:
MNEST008330
species:
Vitis vinifera
miRNA family:
miR3623
source:
miRNEST
Taxonomy by NCBI:
Vitis vinifera
Vitis
Vitaceae
Vitales
rosids incertae sedis
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TCACAAGTTCATCCAAGCACC
miRNA*
TGCTTGGACGAATTTGCTAAG
mismatches:
3
bulges:
0
View larger
pre-miRNA
GCAGAAGAATTTTGATGATCT
TCACAAGTTCATCCAAGCACC
ATCTAAAGCTCAAACAGGCCTACGATTTTCTTCAAAACTAGGCTTATTCATGATGG
TG
CTTGGACGAATTTGCTAAG
AACATTAAGTTCTTGAAA
dot-bracket secondary structure
....((((((((.((((.(((
(..(((((((.((((((((((
(((.........((.(((((((................))))))).))...)))))
))
)))))).)))))))..)))
).))))))))))))....
SIMILARITIES
miRBase
vvi-MIR3623
:
9e-67
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record